---
name: content-repository
description: |
  MySQL storage manager for reference library with versioning and deduplication.
  Triggers: store content, manage repository, document database, content storage.
---

# Content Repository

Manages MySQL storage for the reference library system. Handles document storage, version control, deduplication, and retrieval.

## Prerequisites

- MySQL 8.0+ with utf8mb4 charset
- Config file at `~/.config/reference-curator/db_config.yaml`
- Database `reference_library` initialized with schema

## Quick Reference

### Connection Setup

```python
import yaml
import os
from pathlib import Path

def get_db_config():
    config_path = Path.home() / ".config/reference-curator/db_config.yaml"
    with open(config_path) as f:
        config = yaml.safe_load(f)
    
    # Resolve environment variables
    mysql = config['mysql']
    return {
        'host': mysql['host'],
        'port': mysql['port'],
        'database': mysql['database'],
        'user': os.environ.get('MYSQL_USER', mysql.get('user', '')),
        'password': os.environ.get('MYSQL_PASSWORD', mysql.get('password', '')),
        'charset': mysql['charset']
    }
```

### Core Operations

**Store New Document:**
```python
def store_document(cursor, source_id, title, url, doc_type, raw_content_path):
    sql = """
    INSERT INTO documents (source_id, title, url, doc_type, crawl_date, crawl_status, raw_content_path)
    VALUES (%s, %s, %s, %s, NOW(), 'completed', %s)
    ON DUPLICATE KEY UPDATE 
        version = version + 1,
        previous_version_id = doc_id,
        crawl_date = NOW(),
        raw_content_path = VALUES(raw_content_path)
    """
    cursor.execute(sql, (source_id, title, url, doc_type, raw_content_path))
    return cursor.lastrowid
```

**Check Duplicate:**
```python
def is_duplicate(cursor, url):
    cursor.execute("SELECT doc_id FROM documents WHERE url_hash = SHA2(%s, 256)", (url,))
    return cursor.fetchone() is not None
```

**Get Document by Topic:**
```python
def get_docs_by_topic(cursor, topic_slug, min_quality=0.80):
    sql = """
    SELECT d.doc_id, d.title, d.url, dc.structured_content, dc.quality_score
    FROM documents d
    JOIN document_topics dt ON d.doc_id = dt.doc_id
    JOIN topics t ON dt.topic_id = t.topic_id
    LEFT JOIN distilled_content dc ON d.doc_id = dc.doc_id
    WHERE t.topic_slug = %s 
    AND (dc.review_status = 'approved' OR dc.review_status IS NULL)
    ORDER BY dt.relevance_score DESC
    """
    cursor.execute(sql, (topic_slug,))
    return cursor.fetchall()
```

## Table Quick Reference

| Table | Purpose | Key Fields |
|-------|---------|------------|
| `sources` | Authorized content sources | source_type, credibility_tier, vendor |
| `documents` | Crawled document metadata | url_hash (dedup), version, crawl_status |
| `distilled_content` | Processed summaries | review_status, compression_ratio |
| `review_logs` | QA decisions | quality_score, decision, refactor_instructions |
| `topics` | Taxonomy | topic_slug, parent_topic_id |
| `document_topics` | Many-to-many linking | relevance_score |
| `export_jobs` | Export tracking | export_type, output_format, status |

## Status Values

**crawl_status:** `pending` → `completed` | `failed` | `stale`

**review_status:** `pending` → `in_review` → `approved` | `needs_refactor` | `rejected`

**decision (review):** `approve` | `refactor` | `deep_research` | `reject`

## Common Queries

### Find Stale Documents (needs re-crawl)
```sql
SELECT d.doc_id, d.title, d.url, d.crawl_date
FROM documents d
JOIN crawl_schedule cs ON d.source_id = cs.source_id
WHERE d.crawl_date < DATE_SUB(NOW(), INTERVAL 
    CASE cs.frequency 
        WHEN 'daily' THEN 1 
        WHEN 'weekly' THEN 7 
        WHEN 'biweekly' THEN 14 
        WHEN 'monthly' THEN 30 
    END DAY)
AND cs.is_enabled = TRUE;
```

### Get Pending Reviews
```sql
SELECT dc.distill_id, d.title, d.url, dc.token_count_distilled
FROM distilled_content dc
JOIN documents d ON dc.doc_id = d.doc_id
WHERE dc.review_status = 'pending'
ORDER BY dc.distill_date ASC;
```

### Export-Ready Content
```sql
SELECT d.title, d.url, dc.structured_content, t.topic_slug
FROM documents d
JOIN distilled_content dc ON d.doc_id = dc.doc_id
JOIN document_topics dt ON d.doc_id = dt.doc_id
JOIN topics t ON dt.topic_id = t.topic_id
JOIN review_logs rl ON dc.distill_id = rl.distill_id
WHERE rl.decision = 'approve'
AND rl.quality_score >= 0.85
ORDER BY t.topic_slug, dt.relevance_score DESC;
```

## Workflow Integration

1. **From crawler-orchestrator:** Receive URL + raw content path → `store_document()`
2. **To content-distiller:** Query pending documents → send for processing
3. **From quality-reviewer:** Update `review_status` based on decision
4. **To markdown-exporter:** Query approved content by topic

## Error Handling

- **Duplicate URL:** Silent update (version increment) via `ON DUPLICATE KEY UPDATE`
- **Missing source_id:** Validate against `sources` table before insert
- **Connection failure:** Implement retry with exponential backoff

## Full Schema Reference

See `references/schema.sql` for complete table definitions including indexes and constraints.

## Config File Template

See `references/db_config_template.yaml` for connection configuration template.